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ISSN 打印: 1045-4403

ISSN 在线: 2162-6502

The Impact Factor measures the average number of citations received in a particular year by papers published in the journal during the two preceding years. 2017 Journal Citation Reports (Clarivate Analytics, 2018) IF: 1.6 To calculate the five year Impact Factor, citations are counted in 2017 to the previous five years and divided by the source items published in the previous five years. 2017 Journal Citation Reports (Clarivate Analytics, 2018) 5-Year IF: 2.2 The Immediacy Index is the average number of times an article is cited in the year it is published. The journal Immediacy Index indicates how quickly articles in a journal are cited. Immediacy Index: 0.3 The Eigenfactor score, developed by Jevin West and Carl Bergstrom at the University of Washington, is a rating of the total importance of a scientific journal. Journals are rated according to the number of incoming citations, with citations from highly ranked journals weighted to make a larger contribution to the eigenfactor than those from poorly ranked journals. Eigenfactor: 0.00058 The Journal Citation Indicator (JCI) is a single measurement of the field-normalized citation impact of journals in the Web of Science Core Collection across disciplines. The key words here are that the metric is normalized and cross-disciplinary. JCI: 0.33 SJR: 0.345 SNIP: 0.46 CiteScore™:: 2.5 H-Index: 67

Indexed in

Chromosomal DNA Loops May Constitute Basic Units of the Eukaryotic Genome Organization and Evolution

卷 9, 册 3-4, 1999, pp. 279-283
DOI: 10.1615/CritRevEukarGeneExpr.v9.i3-4.120
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摘要

In eukaryotic cell nuclei the genome is organized into large loops attached to the nuclear matrix. Rearrangements of the genome frequently occur via an illegitimate recombination between loop anchorage sites resulting in deletion or repositioning of DNA loops. The illegitimate recombination between loop anchorage sites is possibly mediated by topoisomerase II. Treatments stabilizing intermediate covalent complexes of topoisomerase II with DNA seem to increase the possibility of illegitimate recombination between loop anchorage regions. On the basis of these and some other observations we suggest that chromosomal DNA loops constitute basic units of the genome evolution, or, in other words, structural blocks of the eukaryotic genome.

对本文的引用
  1. Umanskaya O. N., Bystritskiy A. A., Razin S. V., Chromosome Rearrangement Breakpoint Clustering: The Role of Clonal Selection, Molecular Biology, 39, 3, 2005. Crossref

  2. Razin Sergey V, Farrell Catherine M, Recillas-Targa Félix, , 226, 2003. Crossref

  3. Razin S. V., Spatial organization of the eukaryotic genome and the action of epigenetic mechanisms, Russian Journal of Genetics, 42, 12, 2006. Crossref

  4. Szerlong Heather J., Hansen Jeffrey C., Nucleosome distribution and linker DNA: connecting nuclear function to dynamic chromatin structureThis paper is one of a selection of papers published in a Special Issue entitled 31st Annual International Asilomar Chromatin and Chromosomes Conference, and has undergone the Journal’s usual peer review process., Biochemistry and Cell Biology, 89, 1, 2011. Crossref

  5. Sheval E. V., Polyakov V. Yu., Chromosome scaffold and structural integrity of mitotic chromosomes, Russian Journal of Developmental Biology, 37, 6, 2006. Crossref

  6. Iarovaia Olga V., Borounova Victoria, Vassetzky Yegor S., Razin Sergey V., An unusual extended DNA loop attachment region is located in the human dystrophin gene, Journal of Cellular Physiology, 209, 2, 2006. Crossref

  7. Kantidze Omar L., Iarovaia Olga V., Razin Sergey V., Assembly of nuclear matrix–bound protein complexes involved in non-homologous end joining is induced by inhibition of DNA topoisomerase II, Journal of Cellular Physiology, 207, 3, 2006. Crossref

  8. Murasheva M. I., Kulneva E. I., Chentsov Yu. S., Localization of anti-topoisomerase IIα antibodies under normal conditions and after artificial chromosome condensation and decondensation, Biochemistry (Moscow) Supplement Series A: Membrane and Cell Biology, 2, 4, 2008. Crossref

  9. Li Guohong, Tolstonog Genrich V., Sabasch Michael, Traub Peter, InteractionIn Vitroof Type III Intermediate Filament Proteins with Supercoiled Plasmid DNA and Modulation of Eukaryotic DNA Topoisomerase I and II Activities, DNA and Cell Biology, 21, 10, 2002. Crossref

  10. Kellner Udo, Sehested Maxwell, Jensen Peter B, Gieseler Frank, Rudolph Pierre, Culprit and victim – DNA topoisomerase II, The Lancet Oncology, 3, 4, 2002. Crossref

  11. Sheval E. V., Dudnik O. A., Abramchuk S. S., Polyakov V. Y., Perichromosomal layer proteins associate with chromosome scaffold and nuclear matrix throughout the cell cycle, Biochemistry (Moscow) Supplement Series A: Membrane and Cell Biology, 3, 2, 2009. Crossref

  12. Tolstonog Genrich V., Mothes Elfriede, Shoeman Robert L., Traub Peter, Isolation of SDS-Stable Complexes of the Intermediate Filament Protein Vimentin with Repetitive, Mobile, Nuclear Matrix Attachment Region, and Mitochondrial DNA Sequence Elements from Cultured Mouse and Human Fibroblasts, DNA and Cell Biology, 20, 9, 2001. Crossref

  13. Tolstonog Genrich V., Sabasch Michael, Traub Peter, Cytoplasmic Intermediate Filaments Are Stably Associated with Nuclear Matrices and Potentially Modulate Their DNA-Binding Function, DNA and Cell Biology, 21, 3, 2002. Crossref

  14. Kantidze Omar L., Razin Sergey V., Chromatin loops, illegitimate recombination, and genome evolution, BioEssays, 31, 3, 2009. Crossref

  15. Zhou Cong-Zhao, Liu Bing, Identification and characterization of a silkgland-related matrix association region in Bombyx mori, Gene, 277, 1-2, 2001. Crossref

  16. Brunetti Roberta, Prosseda Gianni, Beghetto Elisa, Colonna Bianca, Micheli Gioacchino, The looped domain organization of the nucleoid in histone-like protein defective Escherichia coli strains***This work is dedicated to Maurice Hofnung, tragically deceased on June 28th, 2001., Biochimie, 83, 9, 2001. Crossref

  17. Razin Sergey V, Ioudinkova Elena S, Trifonov Edward N, Scherrer Klaus, Non-clonability correlates with genomic instability: a case study of a unique DNA region11Edited by M. Yaniv, Journal of Molecular Biology, 307, 2, 2001. Crossref

  18. Barboro Paola, Ferrari Nicoletta, Capaia Matteo, Petretto Andrea, Salvi Sandra, Boccardo Simona, Balbi Cecilia, Expression of nuclear matrix proteins binding matrix attachment regions in prostate cancer. PARP-1: New player in tumor progression, International Journal of Cancer, 137, 7, 2015. Crossref

  19. Woodcock Christopher L, Dimitrov Stefan, Higher-order structure of chromatin and chromosomes, Current Opinion in Genetics & Development, 11, 2, 2001. Crossref

  20. Kantidze Omar L., Razin Sergey V., Chemotherapy-related secondary leukemias: A role for DNA repair by error-prone non-homologous end joining in topoisomerase II — Induced chromosomal rearrangements, Gene, 391, 1-2, 2007. Crossref

  21. Eivazova Elvira R., Gavrilov Aleksey, Pirozhkova Iryna, Petrov Andrei, Iarovaia Olga V., Razin Sergey V., Lipinski Marc, Vassetzky Yegor S., Interaction in vivo between the Two Matrix Attachment Regions Flanking a Single Chromatin Loop, Journal of Molecular Biology, 386, 4, 2009. Crossref

  22. Hellmig Stephan, Gieseler Frank, Ott Stephan, Rosenstiel Phillip, Fischbach Wolfgang, Fölsch Ulrich Robert, Schreiber Stefan, Germline variations of the topoisomerase IIα gene as risk factors for primary gastric B-cell lymphoma, Cancer Letters, 238, 2, 2006. Crossref

  23. Svetlova E. Yu., Razin S.V., Debatisse M., Mammalian recombination hot spot in a DNA loop anchorage region: A model for the study of common fragile sites, Journal of Cellular Biochemistry, 81, S36, 2001. Crossref

  24. Chernov I.P., Akopov S.B., Nikolaev L.G., Sverdlov E.D., Identification and mapping of nuclear matrix-attachment regions in a one megabase locus of human chromosome 19q13.12: Long-range correlation of S/MARs and gene positions, Journal of Cellular Biochemistry, 84, 3, 2002. Crossref

  25. Narwade Nitin, Patel Sonal, Alam Aftab, Chattopadhyay Samit, Mittal Smriti, Kulkarni Abhijeet, Mapping of scaffold/matrix attachment regions in human genome: a data mining exercise, Nucleic Acids Research, 47, 14, 2019. Crossref

  26. Guadarrama‐Ponce Rolando, Aranda‐Anzaldo Armando, The epicenter of chromosomal fragility of Fra14A2, the mouse ortholog of human FRA3B common fragile site, is largely attached to the nuclear matrix in lymphocytes but not in other cell types that do not express such a fragility, Journal of Cellular Biochemistry, 121, 3, 2020. Crossref

  27. Shimizu Noriaki, Shingaki Kenta, Macroscopic folding and replication of the homogeneously staining region in late S phase leads to the appearance of replication bands in mitotic chromosomes, Journal of Cell Science, 117, 22, 2004. Crossref

  28. Iarovaia Olga V., Shkumatov Petr, Razin Sergey V., Breakpoint cluster regions of the AML-1 and ETO genes contain MAR elements and are preferentially associated with the nuclear matrix in proliferating HEL cells, Journal of Cell Science, 117, 19, 2004. Crossref

  29. Razin Sergey V., Zhegalova Irina V., Kantidze Omar L., Domain Model of Eukaryotic Genome Organization: From DNA Loops Fixed on the Nuclear Matrix to TADs, Biochemistry (Moscow), 87, 7, 2022. Crossref

  30. Razin Sergey V., Kantidze Omar L., The twisted path of the 3D genome: where does it lead?, Trends in Biochemical Sciences, 47, 9, 2022. Crossref

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